Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL4A1P02462 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
COL4A1P02462 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A1P02462 AC073352.2-201ENST00000609385 439 ntBASIC18.25■□□□□ 0.51
COL4A1P02462 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A1P02462 AL136295.7-201ENST00000619226 1200 ntBASIC18.25■□□□□ 0.51
COL4A1P02462 AC144522.1-201ENST00000625111 1658 ntBASIC18.25■□□□□ 0.51
COL4A1P02462 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A1P02462 AC092299.1-201ENST00000632679 757 ntBASIC18.25■□□□□ 0.51
COL4A1P02462 AC006453.1-201ENST00000636037 1257 ntBASIC18.25■□□□□ 0.51
COL4A1P02462 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL4A1P02462 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL4A1P02462 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 AC013268.4-201ENST00000637413 2228 ntBASIC18.24■□□□□ 0.51
COL4A1P02462 LINC00528-201ENST00000600723 2160 ntBASIC18.24■□□□□ 0.51
COL4A1P02462 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A1P02462 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A1P02462 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A1P02462 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A1P02462 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL4A1P02462 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A1P02462 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A1P02462 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A1P02462 NPM1P43-201ENST00000558669 786 ntBASIC18.24■□□□□ 0.51
COL4A1P02462 MIR3147-201ENST00000577811 66 ntBASIC18.24■□□□□ 0.51
COL4A1P02462 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A1P02462 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A1P02462 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A1P02462 AC138035.3-201ENST00000622706 2791 ntBASIC18.24■□□□□ 0.51
COL4A1P02462 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL4A1P02462 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 TBC1D3J-201ENST00000620719 1426 ntBASIC18.23■□□□□ 0.51
COL4A1P02462 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A1P02462 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL4A1P02462 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.23■□□□□ 0.51
COL4A1P02462 AC019193.1-201ENST00000506678 823 ntBASIC18.23■□□□□ 0.51
COL4A1P02462 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A1P02462 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A1P02462 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.23■□□□□ 0.51
COL4A1P02462 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
COL4A1P02462 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 AC015909.3-201ENST00000572855 1794 ntBASIC18.23■□□□□ 0.51
COL4A1P02462 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COL4A1P02462 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A1P02462 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL4A1P02462 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A1P02462 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A1P02462 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A1P02462 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.22■□□□□ 0.51
COL4A1P02462 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A1P02462 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A1P02462 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL4A1P02462 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
COL4A1P02462 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.22■□□□□ 0.51
COL4A1P02462 AL353637.1-201ENST00000451571 732 ntBASIC18.22■□□□□ 0.51
COL4A1P02462 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL4A1P02462 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A1P02462 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.22■□□□□ 0.51
COL4A1P02462 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.22■□□□□ 0.51
COL4A1P02462 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.22■□□□□ 0.51
COL4A1P02462 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.22■□□□□ 0.51
COL4A1P02462 RPL17P45-201ENST00000586289 509 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms