Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MBD4O95243 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 MIR1202-201ENST00000408529 83 ntBASIC18.17■□□□□ 0.5
MBD4O95243 POM121L8P-201ENST00000417732 1281 ntBASIC18.17■□□□□ 0.5
MBD4O95243 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.17■□□□□ 0.5
MBD4O95243 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.17■□□□□ 0.5
MBD4O95243 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.17■□□□□ 0.5
MBD4O95243 POM121L9P-203ENST00000441984 1285 ntBASIC18.17■□□□□ 0.5
MBD4O95243 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.17■□□□□ 0.5
MBD4O95243 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.17■□□□□ 0.5
MBD4O95243 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.17■□□□□ 0.5
MBD4O95243 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.17■□□□□ 0.5
MBD4O95243 AC006453.4-201ENST00000636949 1252 ntBASIC18.17■□□□□ 0.5
MBD4O95243 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.17■□□□□ 0.5
MBD4O95243 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.17■□□□□ 0.5
MBD4O95243 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 AC006486.2-201ENST00000624246 2199 ntBASIC18.17■□□□□ 0.5
MBD4O95243 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MBD4O95243 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 WASH3P-207ENST00000560956 1394 ntBASIC18.17■□□□□ 0.5
MBD4O95243 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.17■□□□□ 0.5
MBD4O95243 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.16■□□□□ 0.5
MBD4O95243 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
MBD4O95243 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MBD4O95243 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
MBD4O95243 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.16■□□□□ 0.5
MBD4O95243 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.16■□□□□ 0.5
MBD4O95243 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 AC008687.7-202ENST00000637404 953 ntBASIC18.16■□□□□ 0.5
MBD4O95243 AL033527.4-201ENST00000641026 673 ntBASIC18.16■□□□□ 0.5
MBD4O95243 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.16■□□□□ 0.5
MBD4O95243 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.16■□□□□ 0.5
MBD4O95243 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.16■□□□□ 0.5
MBD4O95243 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MBD4O95243 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 LINC00554-201ENST00000564841 3011 ntBASIC18.15■□□□□ 0.5
MBD4O95243 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MBD4O95243 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.15■□□□□ 0.5
MBD4O95243 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MBD4O95243 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.15■□□□□ 0.5
MBD4O95243 AC079316.1-201ENST00000548397 411 ntBASIC18.15■□□□□ 0.5
MBD4O95243 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 AL603764.1-201ENST00000636452 321 ntBASIC18.15■□□□□ 0.5
MBD4O95243 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MBD4O95243 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms