Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 AC007967.2-201ENST00000432613 625 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 KRT18P2-201ENST00000447938 1258 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 PHKG1P2-201ENST00000457537 863 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.73□□□□□ -0.21
CDRT1O95170 AL161645.1-201ENST00000622716 1255 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CDRT1O95170 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.73□□□□□ -0.21
CDRT1O95170 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.73□□□□□ -0.21
CDRT1O95170 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 AP000845.1-201ENST00000581677 2131 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.73□□□□□ -0.21
CDRT1O95170 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 AC104109.2-201ENST00000602919 1418 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 HLA-A-201ENST00000376802 1334 ntBASIC13.72□□□□□ -0.21
CDRT1O95170 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.72□□□□□ -0.21
CDRT1O95170 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 AL662844.1-201ENST00000546340 181 ntBASIC13.72□□□□□ -0.21
CDRT1O95170 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.72□□□□□ -0.21
CDRT1O95170 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.72□□□□□ -0.21
CDRT1O95170 AC011467.4-201ENST00000594891 528 ntBASIC13.72□□□□□ -0.21
CDRT1O95170 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.72□□□□□ -0.21
CDRT1O95170 COL6A4P2-202ENST00000504443 2753 ntBASIC13.72□□□□□ -0.21
CDRT1O95170 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 AC015802.1-201ENST00000588104 1449 ntBASIC13.72□□□□□ -0.21
CDRT1O95170 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDRT1O95170 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CDRT1O95170 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDRT1O95170 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDRT1O95170 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CDRT1O95170 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
CDRT1O95170 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDRT1O95170 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDRT1O95170 AC009078.2-202ENST00000463353 338 ntBASIC13.71□□□□□ -0.21
CDRT1O95170 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.71□□□□□ -0.21
CDRT1O95170 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.71□□□□□ -0.21
CDRT1O95170 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.71□□□□□ -0.21
CDRT1O95170 AL138918.1-201ENST00000568306 659 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms