Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.63□□□□□ -0.23
PFDN1O60925 CROCCP5-201ENST00000436658 830 ntBASIC13.63□□□□□ -0.23
PFDN1O60925 SEC1P-202ENST00000473944 940 ntBASIC13.63□□□□□ -0.23
PFDN1O60925 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.63□□□□□ -0.23
PFDN1O60925 AC020765.3-201ENST00000613051 740 ntBASIC13.63□□□□□ -0.23
PFDN1O60925 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 AC097374.2-201ENST00000618617 1306 ntBASIC13.63□□□□□ -0.23
PFDN1O60925 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 POM121L14P-201ENST00000406100 1558 ntBASIC13.62□□□□□ -0.23
PFDN1O60925 AC009336.1-201ENST00000608941 1553 ntBASIC13.62□□□□□ -0.23
PFDN1O60925 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC13.62□□□□□ -0.23
PFDN1O60925 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.62□□□□□ -0.23
PFDN1O60925 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.62□□□□□ -0.23
PFDN1O60925 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 AC097488.1-201ENST00000507834 756 ntBASIC13.62□□□□□ -0.23
PFDN1O60925 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.62□□□□□ -0.23
PFDN1O60925 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 DLX4-206ENST00000611342 1662 ntBASIC13.62□□□□□ -0.23
PFDN1O60925 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 AL358933.1-201ENST00000565046 2830 ntBASIC13.62□□□□□ -0.23
PFDN1O60925 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PFDN1O60925 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PFDN1O60925 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PFDN1O60925 AC111170.3-201ENST00000624282 2464 ntBASIC13.62□□□□□ -0.23
PFDN1O60925 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PFDN1O60925 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.62□□□□□ -0.23
PFDN1O60925 CSPG4P13-202ENST00000567704 4801 ntBASIC13.61□□□□□ -0.23
PFDN1O60925 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
PFDN1O60925 U82695.1-201ENST00000635752 1889 ntBASIC13.61□□□□□ -0.23
PFDN1O60925 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
PFDN1O60925 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.61□□□□□ -0.23
PFDN1O60925 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PFDN1O60925 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.61□□□□□ -0.23
PFDN1O60925 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.61□□□□□ -0.23
PFDN1O60925 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.61□□□□□ -0.23
PFDN1O60925 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PFDN1O60925 AP002414.1-201ENST00000391405 1147 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms