Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PHF1O43189 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.33□□□□□ -0.28
PHF1O43189 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.33□□□□□ -0.28
PHF1O43189 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PHF1O43189 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PHF1O43189 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PHF1O43189 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 AC092933.1-201ENST00000393644 945 ntBASIC13.32□□□□□ -0.28
PHF1O43189 RN7SL837P-201ENST00000463010 287 ntBASIC13.32□□□□□ -0.28
PHF1O43189 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.32□□□□□ -0.28
PHF1O43189 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.32□□□□□ -0.28
PHF1O43189 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 RN7SL219P-201ENST00000582872 296 ntBASIC13.32□□□□□ -0.28
PHF1O43189 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PHF1O43189 MIR6787-201ENST00000616675 61 ntBASIC13.32□□□□□ -0.28
PHF1O43189 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 AC090616.6-203ENST00000579186 1945 ntBASIC13.32□□□□□ -0.28
PHF1O43189 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 AC092127.1-201ENST00000567093 3455 ntBASIC13.32□□□□□ -0.28
PHF1O43189 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PHF1O43189 KRT8P44-201ENST00000441609 1350 ntBASIC13.32□□□□□ -0.28
PHF1O43189 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.32□□□□□ -0.28
PHF1O43189 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.32□□□□□ -0.28
PHF1O43189 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PHF1O43189 AC105250.1-201ENST00000509378 2057 ntBASIC13.32□□□□□ -0.28
PHF1O43189 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PHF1O43189 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
PHF1O43189 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 SPDYE17-201ENST00000412399 783 ntBASIC13.31□□□□□ -0.28
PHF1O43189 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 AC119751.2-201ENST00000504529 210 ntBASIC13.31□□□□□ -0.28
PHF1O43189 DOC2GP-202ENST00000514950 1163 ntBASIC13.31□□□□□ -0.28
PHF1O43189 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.31□□□□□ -0.28
PHF1O43189 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.31□□□□□ -0.28
PHF1O43189 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.31□□□□□ -0.28
PHF1O43189 MIR6069-201ENST00000620069 79 ntBASIC13.31□□□□□ -0.28
PHF1O43189 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms