Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 AC136621.1-201ENST00000624017 2304 ntBASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 SSR4P1-203ENST00000599569 2260 ntBASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA3F8WFD2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA3F8WFD2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC099336.1-201ENST00000417053 1171 ntBASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 C2orf27AP3-201ENST00000434123 579 ntBASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 CSF2RBP1-201ENST00000447905 391 ntBASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AL354718.3-201ENST00000616414 581 ntBASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 CR382287.1-201ENST00000623954 586 ntBASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC009090.5-201ENST00000624886 2285 ntBASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA3F8WFD2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms