Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC098850.1-201ENST00000419919 790 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 GHSR-202ENST00000427970 912 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC114812.1-204ENST00000449669 728 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 KRT17P7-201ENST00000451704 1104 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC005225.4-201ENST00000557330 545 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC124283.3-201ENST00000570869 594 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 SAMD11P1-201ENST00000571429 661 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 CTBP2P3-201ENST00000585629 1255 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC015936.2-201ENST00000593177 259 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 WFDC1-204ENST00000613603 549 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AL603764.1-201ENST00000636452 321 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.14□□□□□ -0.63
SMIM9A6NGZ8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC022532.1-201ENST00000624563 1728 ntBASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC104457.1-201ENST00000401024 814 ntBASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 ACTG1P3-201ENST00000431775 1114 ntBASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC007389.4-201ENST00000454674 793 ntBASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 KRT18P25-201ENST00000508931 1278 ntBASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.13□□□□□ -0.63
SMIM9A6NGZ8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms