Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRIT2A6NDA9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 RNU1-114P-201ENST00000365297 166 ntBASIC14.53□□□□□ -0.08
LRIT2A6NDA9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRIT2A6NDA9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 AC067930.6-201ENST00000623257 4947 ntBASIC14.52□□□□□ -0.08
LRIT2A6NDA9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 KRT8P14-201ENST00000414254 1442 ntBASIC14.52□□□□□ -0.08
LRIT2A6NDA9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRIT2A6NDA9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 KLF2P2-201ENST00000416807 1039 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 AC093433.1-201ENST00000458048 571 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 RN7SL752P-201ENST00000463779 287 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 RN7SL692P-201ENST00000464677 288 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 AP005018.1-201ENST00000525475 301 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 AL596325.1-201ENST00000563991 1082 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 AC009486.1-201ENST00000569860 813 ntBASIC14.52□□□□□ -0.09
LRIT2A6NDA9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LRIT2A6NDA9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms