Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LAMB4A4D0S4 AC008894.3-201ENST00000624324 3103 ntBASIC18.82■□□□□ 0.6
LAMB4A4D0S4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 AC242376.1-201ENST00000559033 726 ntBASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 AC009884.2-201ENST00000603110 324 ntBASIC18.81■□□□□ 0.6
LAMB4A4D0S4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMB4A4D0S4 AC027601.3-201ENST00000622907 509 ntBASIC18.81■□□□□ 0.6
LAMB4A4D0S4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 ST13P19-201ENST00000442505 1124 ntBASIC18.8■□□□□ 0.6
LAMB4A4D0S4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 RTN3P1-201ENST00000536295 711 ntBASIC18.8■□□□□ 0.6
LAMB4A4D0S4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMB4A4D0S4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 AC006335.1-201ENST00000445200 547 ntBASIC18.79■□□□□ 0.6
LAMB4A4D0S4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 PRKXP1-201ENST00000561423 1122 ntBASIC18.79■□□□□ 0.6
LAMB4A4D0S4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMB4A4D0S4 AC022532.1-201ENST00000624563 1728 ntBASIC18.79■□□□□ 0.6
LAMB4A4D0S4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms