Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 CYP51A1P3-201ENST00000400072 1428 ntBASIC20.34■□□□□ 0.85
SBNO1A3KN83 AC097065.1-201ENST00000425737 517 ntBASIC20.34■□□□□ 0.85
SBNO1A3KN83 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 RPL8P2-201ENST00000430538 502 ntBASIC20.34■□□□□ 0.85
SBNO1A3KN83 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SBNO1A3KN83 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SBNO1A3KN83 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SBNO1A3KN83 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SBNO1A3KN83 AC136759.1-202ENST00000530858 2194 ntBASIC20.33■□□□□ 0.85
SBNO1A3KN83 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 AC090616.6-203ENST00000579186 1945 ntBASIC20.33■□□□□ 0.84
SBNO1A3KN83 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 AC025271.4-201ENST00000621477 1726 ntBASIC20.33■□□□□ 0.84
SBNO1A3KN83 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
SBNO1A3KN83 PHBP15-201ENST00000574228 665 ntBASIC20.33■□□□□ 0.84
SBNO1A3KN83 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SBNO1A3KN83 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AL137783.1-201ENST00000623494 1896 ntBASIC20.32■□□□□ 0.84
SBNO1A3KN83 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AL139384.1-201ENST00000612143 3047 ntBASIC20.32■□□□□ 0.84
SBNO1A3KN83 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AP000356.3-201ENST00000382243 753 ntBASIC20.32■□□□□ 0.84
SBNO1A3KN83 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AL157407.1-201ENST00000435784 904 ntBASIC20.32■□□□□ 0.84
SBNO1A3KN83 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AC006122.1-201ENST00000493323 440 ntBASIC20.32■□□□□ 0.84
SBNO1A3KN83 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SBNO1A3KN83 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SBNO1A3KN83 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms