Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 CLUHP6-201ENST00000580789 941 ntBASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 AL158070.2-201ENST00000623713 1621 ntBASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 AL359258.3-201ENST00000622910 2331 ntBASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI2Q9Y5P3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 ACTBP11-201ENST00000436287 1126 ntBASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AP001063.1-201ENST00000568332 529 ntBASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 RN7SL219P-201ENST00000582872 296 ntBASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AC010319.3-201ENST00000597028 470 ntBASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 WASH3P-207ENST00000560956 1394 ntBASIC15.48■□□□□ 0.07
RAI2Q9Y5P3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 AP000845.1-201ENST00000581677 2131 ntBASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 AL645937.2-201ENST00000396808 931 ntBASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 NUS1P3-201ENST00000423502 862 ntBASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms