Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC055811.4-201ENST00000624039 1754 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 FAM90A2P-201ENST00000511144 1395 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 FAM90A25P-201ENST00000528404 1395 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 HLA-K-203ENST00000430151 1046 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PUDPP3-201ENST00000445368 636 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC084752.1-201ENST00000509766 622 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 LINC01165-201ENST00000445190 1623 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PRAL-201ENST00000624952 3286 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AC004554.1-201ENST00000422830 1468 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 AL137783.1-201ENST00000623494 1896 ntBASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
HECTD4Q9Y4D8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
HECTD4Q9Y4D8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 AL109809.1-201ENST00000418979 1367 ntBASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 AL603764.1-201ENST00000636452 321 ntBASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC9.77□□□□□ -0.85
HECTD4Q9Y4D8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms