Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 EEF1DP1-201ENST00000585891 896 ntBASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AL023775.1-201ENST00000454907 1746 ntBASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 CICP23-201ENST00000605013 2741 ntBASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 HIST2H2BB-201ENST00000449108 381 ntBASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 FAM86HP-204ENST00000513466 959 ntBASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AP006547.1-201ENST00000563435 692 ntBASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AC002472.3-201ENST00000640124 621 ntBASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPC1L1Q9UHC9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 MIR4683-201ENST00000579659 81 ntBASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 AC008825.2-201ENST00000603374 718 ntBASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPC1L1Q9UHC9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC20.27■□□□□ 0.84
NPC1L1Q9UHC9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms