Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.31
RIMBP3Q9UFD9 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RIMBP3Q9UFD9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 FAM86FP-201ENST00000338711 969 ntBASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 DPY19L2P4-201ENST00000479881 442 ntBASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 DLK1-205ENST00000556051 469 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 COQ4-204ENST00000608951 781 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 REXO1L2P-201ENST00000425429 2069 ntBASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 U73169.1-201ENST00000395152 367 ntBASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 RN7SL767P-201ENST00000493013 295 ntBASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 AC010531.8-201ENST00000623341 685 ntBASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
RIMBP3Q9UFD9 ME2P1-201ENST00000426028 1970 ntBASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 AC007679.1-201ENST00000458609 502 ntBASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 ESR1-214ENST00000638569 132 ntTSL 5 BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 AL365181.1-201ENST00000564032 1828 ntBASIC23.25■■□□□ 1.31
RIMBP3Q9UFD9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 HNRNPA1P27-201ENST00000412087 955 ntBASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AC093106.1-201ENST00000437271 352 ntBASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 GALP-202ENST00000440823 889 ntTSL 5 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AL132994.1-201ENST00000554098 400 ntBASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 BOLA3P2-201ENST00000586496 323 ntBASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AL133467.4-201ENST00000602953 725 ntBASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RIMBP3Q9UFD9 AC006449.6-201ENST00000612330 2296 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms