Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLC52A1Q9NWF4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 RPL8P2-201ENST00000430538 502 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC131206.1-201ENST00000538078 1211 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 MIR3188-201ENST00000583494 85 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC005632.3-201ENST00000605544 308 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AP001065.2-201ENST00000617205 644 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 AC133540.1-201ENST00000620845 1019 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 ZBED1P1-201ENST00000502364 1930 ntBASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
SLC52A1Q9NWF4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 AL592076.1-201ENST00000424448 303 ntBASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 XBP1P1-201ENST00000436573 652 ntBASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 MIR4649-201ENST00000582839 64 ntBASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 LINC01783-202ENST00000614408 828 ntBASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 BX284668.2-205ENST00000619677 828 ntBASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC52A1Q9NWF4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLC52A1Q9NWF4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLC52A1Q9NWF4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLC52A1Q9NWF4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 AP005117.1-202ENST00000581724 1908 ntBASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms