Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 HES6-206ENST00000409574 738 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 GPX1-201ENST00000419349 1106 ntBASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 BX664725.1-201ENST00000438252 379 ntBASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 FUT6-201ENST00000286955 2847 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CDC42SE1Q9NRR8 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 MCRIP2P1-201ENST00000394346 511 ntBASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC027682.1-201ENST00000562846 899 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms