Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CD248Q9HCU0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD248Q9HCU0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CD248Q9HCU0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.21■□□□□ 0.18
CD248Q9HCU0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD248Q9HCU0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.21■□□□□ 0.18
CD248Q9HCU0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 AC067930.6-201ENST00000623257 4947 ntBASIC16.2■□□□□ 0.18
CD248Q9HCU0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 CDC14C-201ENST00000428251 1719 ntBASIC16.2■□□□□ 0.18
CD248Q9HCU0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 AC112492.5-201ENST00000421897 457 ntBASIC16.2■□□□□ 0.18
CD248Q9HCU0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 LINC02447-202ENST00000501888 2146 ntBASIC16.2■□□□□ 0.18
CD248Q9HCU0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 MIR8072-201ENST00000614241 80 ntBASIC16.2■□□□□ 0.18
CD248Q9HCU0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD248Q9HCU0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CD248Q9HCU0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 COL6A4P2-202ENST00000504443 2753 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 HLA-V-201ENST00000429037 534 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 TMEM261P1-201ENST00000604899 340 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 WFDC1-204ENST00000613603 549 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 RPSAP52-203ENST00000622976 1023 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD248Q9HCU0 AC006449.6-201ENST00000612330 2296 ntBASIC16.19■□□□□ 0.18
CD248Q9HCU0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.19■□□□□ 0.18
CD248Q9HCU0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms