Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 AC003102.2-201ENST00000589195 1469 ntBASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH11XQ9BZA7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 TLE1P1-201ENST00000422965 589 ntBASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 RN7SL181P-201ENST00000462921 277 ntBASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AC104784.1-201ENST00000473096 294 ntBASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AC103691.2-201ENST00000618824 433 ntBASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 TBC1D3J-201ENST00000620719 1426 ntBASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH11XQ9BZA7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 AC239868.1-201ENST00000369385 493 ntBASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH11XQ9BZA7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH11XQ9BZA7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH11XQ9BZA7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
PCDH11XQ9BZA7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH11XQ9BZA7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 AC098935.1-201ENST00000446057 611 ntBASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 COX6A1P2-201ENST00000620597 330 ntBASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 KRT8P21-201ENST00000430398 1491 ntBASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 AC020916.1-201ENST00000587762 1774 ntBASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11XQ9BZA7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms