Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO3Q9BXY4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO3Q9BXY4 GRK6P1-201ENST00000400595 1711 ntBASIC14.01□□□□□ -0.17
RSPO3Q9BXY4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO3Q9BXY4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RSPO3Q9BXY4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RSPO3Q9BXY4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 AC098850.1-201ENST00000419919 790 ntBASIC14□□□□□ -0.17
RSPO3Q9BXY4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 BRI3BPP1-201ENST00000594224 787 ntBASIC14□□□□□ -0.17
RSPO3Q9BXY4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 AL049840.4-201ENST00000602422 811 ntBASIC14□□□□□ -0.17
RSPO3Q9BXY4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 CROCCP1-201ENST00000426910 5675 ntBASIC14□□□□□ -0.17
RSPO3Q9BXY4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14□□□□□ -0.17
RSPO3Q9BXY4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO3Q9BXY4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 DUX4L47-201ENST00000566374 394 ntBASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 AC106028.4-201ENST00000614509 607 ntBASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms