Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 RN7SL838P-201ENST00000481676 295 ntBASIC15.03■□□□□ -0
COL25A1Q9BXS0 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 AC004923.3-201ENST00000527532 355 ntBASIC15.03■□□□□ -0
COL25A1Q9BXS0 ABCC6P1-203ENST00000565566 1170 ntBASIC15.03■□□□□ -0
COL25A1Q9BXS0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.03■□□□□ -0
COL25A1Q9BXS0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL25A1Q9BXS0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 TEKT4P2-202ENST00000559466 1312 ntBASIC15.02■□□□□ -0
COL25A1Q9BXS0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PYY2-201ENST00000315776 282 ntBASIC15.02■□□□□ -0
COL25A1Q9BXS0 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 AC073869.2-201ENST00000417338 1026 ntBASIC15.02■□□□□ -0
COL25A1Q9BXS0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 RN7SL530P-201ENST00000485097 298 ntBASIC15.02■□□□□ -0
COL25A1Q9BXS0 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.02■□□□□ -0
COL25A1Q9BXS0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
COL25A1Q9BXS0 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 IFNL3P1-201ENST00000595082 501 ntBASIC15.02■□□□□ -0
COL25A1Q9BXS0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
COL25A1Q9BXS0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 AC022532.1-201ENST00000624563 1728 ntBASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL25A1Q9BXS0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 MIR193A-201ENST00000384882 88 ntBASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AC004910.1-201ENST00000433493 787 ntBASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AC069421.1-201ENST00000447462 323 ntBASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AC098799.1-201ENST00000504752 800 ntBASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.01□□□□□ -0.01
COL25A1Q9BXS0 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms