Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 OR8S1-201ENST00000310194 1080 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AL365330.1-201ENST00000607459 531 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC138969.3-201ENST00000546612 1459 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC138932.2-201ENST00000548268 1459 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC126755.4-201ENST00000549796 1459 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 AC027612.1-201ENST00000445234 2395 ntBASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAF4Q9BUZ4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
TRAF4Q9BUZ4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAF4Q9BUZ4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 SPDYE18-201ENST00000510091 1050 ntBASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 AC090616.6-203ENST00000579186 1945 ntBASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 DGCR9-201ENST00000609630 2415 ntBASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 AC004790.1-201ENST00000612686 536 ntBASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 AC005622.1-201ENST00000636801 1703 ntBASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF4Q9BUZ4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAF4Q9BUZ4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms