Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 KRT18P64-201ENST00000434946 1219 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 RPL13AP23-201ENST00000480739 586 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AC069335.1-201ENST00000489972 472 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AC105021.1-202ENST00000570572 669 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AC084121.4-201ENST00000641598 221 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AF228730.8-201ENST00000642140 221 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PTENP1-202ENST00000532280 3996 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 SPDYE17-201ENST00000412399 783 ntBASIC14.94□□□□□ -0.02
EBF4Q9BQW3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AC009078.2-202ENST00000463353 338 ntBASIC14.94□□□□□ -0.02
EBF4Q9BQW3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AL662844.1-201ENST00000546340 181 ntBASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 AC025181.2-201ENST00000606994 802 ntBASIC14.94□□□□□ -0.02
EBF4Q9BQW3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.94□□□□□ -0.02
EBF4Q9BQW3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
EBF4Q9BQW3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms