Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 RPL37AP1-201ENST00000412502 279 ntBASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TSSK5P-201ENST00000423978 907 ntBASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TEX28P1-201ENST00000613479 1221 ntBASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TEX28P2-201ENST00000617764 1221 ntBASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AC092135.3-201ENST00000624151 1846 ntBASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1CQ9BQE3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MIR661-201ENST00000384842 89 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC236430.1-201ENST00000402231 743 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AL079307.3-201ENST00000556114 283 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 RN7SL204P-201ENST00000582831 262 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC138761.1-201ENST00000584393 385 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC026979.3-201ENST00000607315 403 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC097376.2-205ENST00000610159 5334 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms