Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 FAM197Y7-201ENST00000432892 766 ntBASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 EIF3FP3-201ENST00000434851 1086 ntBASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 CSF2RBP1-201ENST00000447905 391 ntBASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 RNA5SP412-201ENST00000516234 123 ntBASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 AC006453.4-201ENST00000636949 1252 ntBASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDK5RAP1Q96SZ6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 MROH4P-201ENST00000431302 1578 ntBASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 HLA-V-201ENST00000429037 534 ntBASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TSPY26P-202ENST00000565928 3884 ntBASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AHCYP2-201ENST00000430630 1300 ntBASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AC136621.1-201ENST00000624017 2304 ntBASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.84■□□□□ 0.13
CDK5RAP1Q96SZ6 AC063926.3-201ENST00000624734 5658 ntBASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.83■□□□□ 0.13
CDK5RAP1Q96SZ6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms