Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 MKL1-204ENST00000402630 747 ntTSL 2 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 ASS1P2-201ENST00000439895 1223 ntBASIC4.46□□□□□ -1.69
HMCN1Q96RW7 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 PTMAP5-202ENST00000607242 1162 ntBASIC4.46□□□□□ -1.69
HMCN1Q96RW7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC4.46□□□□□ -1.69
HMCN1Q96RW7 AC009041.4-201ENST00000620075 638 ntBASIC4.46□□□□□ -1.69
HMCN1Q96RW7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
HMCN1Q96RW7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC127383.1-201ENST00000444697 1800 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 PCDHB18P-201ENST00000524813 2368 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 HNRNPA1P27-201ENST00000412087 955 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 OR8T1P-201ENST00000421347 918 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AL137244.1-201ENST00000422931 865 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 OR4C14P-201ENST00000440929 923 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC010442.2-201ENST00000509301 407 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RPSAP12-201ENST00000435879 888 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 HNRNPA1P10-201ENST00000444945 962 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RN7SL564P-201ENST00000496309 250 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC099328.1-201ENST00000498809 1030 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 KRT18P45-201ENST00000515347 1333 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RN7SL665P-201ENST00000578793 300 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 AC245884.8-201ENST00000599382 880 ntBASIC4.46□□□□□ -1.7
HMCN1Q96RW7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms