Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 FNTAP2-201ENST00000430308 634 ntBASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 EIF3FP3-201ENST00000434851 1086 ntBASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 COX5BP1-201ENST00000507622 393 ntBASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 AC104640.1-201ENST00000562617 2109 ntBASIC17.32■□□□□ 0.36
SYNGAP1Q96PV0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 POM121L8P-201ENST00000417732 1281 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 POM121L9P-203ENST00000441984 1285 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 AC005077.2-201ENST00000449786 690 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 HIST2H2BC-201ENST00000498492 580 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 RN7SL713P-201ENST00000582127 302 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms