Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AC022532.1-201ENST00000624563 1728 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AL139094.1-201ENST00000405549 1188 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AC106760.1-201ENST00000508690 800 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 RAB43P1-201ENST00000561790 589 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 PRSS30P-206ENST00000641773 873 ntBASIC15.77■□□□□ 0.12
RPRD1AQ96P16 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPRD1AQ96P16 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 MIR600HG-201ENST00000449175 5984 ntBASIC15.77■□□□□ 0.11
RPRD1AQ96P16 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 AC012508.2-201ENST00000567613 1472 ntBASIC15.77■□□□□ 0.11
RPRD1AQ96P16 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPRD1AQ96P16 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 AL109954.1-202ENST00000564051 2148 ntBASIC15.76■□□□□ 0.11
RPRD1AQ96P16 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 AC112492.5-201ENST00000421897 457 ntBASIC15.76■□□□□ 0.11
RPRD1AQ96P16 AC234783.1-201ENST00000441761 496 ntBASIC15.76■□□□□ 0.11
RPRD1AQ96P16 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 LRRC59-203ENST00000576448 1531 ntBASIC15.76■□□□□ 0.11
RPRD1AQ96P16 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.76■□□□□ 0.11
RPRD1AQ96P16 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPRD1AQ96P16 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms