Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 MIR3619-201ENST00000579667 83 ntBASIC17.91■□□□□ 0.46
TRIM47Q96LD4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AC132938.4-201ENST00000623835 848 ntBASIC17.91■□□□□ 0.46
TRIM47Q96LD4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 U62317.3-201ENST00000608319 855 ntBASIC17.9■□□□□ 0.46
TRIM47Q96LD4 AP005019.2-201ENST00000615104 511 ntBASIC17.9■□□□□ 0.46
TRIM47Q96LD4 AC138627.1-207ENST00000641560 1006 ntBASIC17.9■□□□□ 0.46
TRIM47Q96LD4 AC067930.6-201ENST00000623257 4947 ntBASIC17.9■□□□□ 0.46
TRIM47Q96LD4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM47Q96LD4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM47Q96LD4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TRIM47Q96LD4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.89■□□□□ 0.46
TRIM47Q96LD4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 AC091046.1-201ENST00000331871 207 ntBASIC17.89■□□□□ 0.45
TRIM47Q96LD4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 RN7SL769P-201ENST00000469386 295 ntBASIC17.89■□□□□ 0.45
TRIM47Q96LD4 RNA5SP486-201ENST00000515961 83 ntBASIC17.89■□□□□ 0.45
TRIM47Q96LD4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM47Q96LD4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms