Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC091951.1-201ENST00000512854 2465 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 MIR658-201ENST00000385210 100 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 POM121L8P-201ENST00000417732 1281 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC245100.3-201ENST00000441281 285 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 POM121L9P-203ENST00000441984 1285 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 FO681548.1-201ENST00000455617 1132 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC026434.2-201ENST00000506094 1078 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC078819.1-201ENST00000547454 765 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 AC012085.1-201ENST00000548270 765 ntBASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ECHDC3Q96DC8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AL359881.2-201ENST00000602973 570 ntBASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
ECHDC3Q96DC8 HYMAI-201ENST00000635591 3347 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms