Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 AL133215.2-201ENST00000609242 977 ntBASIC14.78□□□□□ -0.04
VPS33AQ96AX1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 AC126335.2-201ENST00000623362 4637 ntBASIC14.78□□□□□ -0.04
VPS33AQ96AX1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS33AQ96AX1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS33AQ96AX1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 AC074338.1-201ENST00000416825 156 ntBASIC14.77□□□□□ -0.05
VPS33AQ96AX1 AC004832.2-201ENST00000426397 482 ntBASIC14.77□□□□□ -0.05
VPS33AQ96AX1 MKNK2P1-201ENST00000437526 628 ntBASIC14.77□□□□□ -0.05
VPS33AQ96AX1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 POLD2P1-201ENST00000511220 997 ntBASIC14.77□□□□□ -0.05
VPS33AQ96AX1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 AC105339.1-204ENST00000636249 355 ntBASIC14.77□□□□□ -0.05
VPS33AQ96AX1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS33AQ96AX1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
VPS33AQ96AX1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms