Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ECM1P1-201ENST00000604092 1279 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 AC006453.4-201ENST00000636949 1252 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PRSS30P-206ENST00000641773 873 ntBASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.06■□□□□ 0.16
SHKBP1Q8TBC3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 Z93015.1-201ENST00000451718 390 ntBASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 AC103810.3-201ENST00000583567 96 ntBASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHKBP1Q8TBC3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 GPAA1P2-201ENST00000417923 928 ntBASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 BCYRN1-201ENST00000418539 200 ntBASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 NUS1P3-201ENST00000423502 862 ntBASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 AL118558.3-201ENST00000607414 1079 ntBASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SHKBP1Q8TBC3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms