Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AC106881.1-201ENST00000605849 3329 ntBASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 AC098850.1-201ENST00000419919 790 ntBASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.49□□□□□ -0.09
SIMC1Q8NDZ2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 RARRES2P5-201ENST00000564013 466 ntBASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 CHCHD2P3-201ENST00000603038 451 ntBASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AC000095.1-201ENST00000603208 874 ntBASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.48□□□□□ -0.09
SIMC1Q8NDZ2 AC008761.3-201ENST00000624803 892 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms