Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AC245100.3-201ENST00000441281 285 ntBASIC16.67■□□□□ 0.26
VPS52Q8N1B4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AP001582.1-201ENST00000525856 295 ntBASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AC107373.2-201ENST00000607735 490 ntBASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AC244093.1-201ENST00000610837 814 ntBASIC16.67■□□□□ 0.26
VPS52Q8N1B4 AC009542.2-202ENST00000619004 1067 ntBASIC16.67■□□□□ 0.26
VPS52Q8N1B4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.67■□□□□ 0.26
VPS52Q8N1B4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS52Q8N1B4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.66■□□□□ 0.26
VPS52Q8N1B4 RPL13AP20-201ENST00000459725 609 ntBASIC16.66■□□□□ 0.26
VPS52Q8N1B4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS52Q8N1B4 PRAL-201ENST00000624952 3286 ntBASIC16.65■□□□□ 0.26
VPS52Q8N1B4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS52Q8N1B4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms