Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AC006335.1-201ENST00000445200 547 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 RPL18P13-201ENST00000478088 569 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 RN7SL371P-201ENST00000578099 267 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AL513523.2-202ENST00000427283 2040 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 INE2-201ENST00000630399 1874 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 RPS2P36-201ENST00000456516 831 ntBASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NPAS4Q8IUM7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS4Q8IUM7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS4Q8IUM7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.21■□□□□ 0.18
NPAS4Q8IUM7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.21■□□□□ 0.18
NPAS4Q8IUM7 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.21■□□□□ 0.18
NPAS4Q8IUM7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS4Q8IUM7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 1158.3 ms