Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 AL928921.2-201ENST00000641325 2442 ntBASIC13.72□□□□□ -0.21
LRRC28Q86X40 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 AC018892.3-201ENST00000623986 2499 ntBASIC13.71□□□□□ -0.21
LRRC28Q86X40 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 AC018529.1-201ENST00000613063 361 ntBASIC13.71□□□□□ -0.21
LRRC28Q86X40 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRC28Q86X40 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRC28Q86X40 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRC28Q86X40 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRC28Q86X40 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRC28Q86X40 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
LRRC28Q86X40 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRC28Q86X40 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.71□□□□□ -0.22
LRRC28Q86X40 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRC28Q86X40 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRC28Q86X40 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRC28Q86X40 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRC28Q86X40 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRC28Q86X40 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 AL589702.1-201ENST00000641229 1509 ntBASIC13.7□□□□□ -0.22
LRRC28Q86X40 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 AC051619.7-201ENST00000568314 623 ntBASIC13.7□□□□□ -0.22
LRRC28Q86X40 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 MIR6080-201ENST00000617359 66 ntBASIC13.7□□□□□ -0.22
LRRC28Q86X40 AC093512.1-201ENST00000617969 520 ntBASIC13.7□□□□□ -0.22
LRRC28Q86X40 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.7□□□□□ -0.22
LRRC28Q86X40 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms