Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 KRT18P3-201ENST00000451602 1288 ntBASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 SLED1-202ENST00000512051 380 ntBASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 AC140113.2-201ENST00000604370 208 ntBASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 IL9RP2-201ENST00000423948 1312 ntBASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRTM1Q86UE6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LRRTM1Q86UE6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRTM1Q86UE6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AL591424.1-201ENST00000442569 1213 ntBASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AL592309.1-201ENST00000443127 649 ntBASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AC025181.2-201ENST00000606994 802 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms