Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 RN7SL752P-201ENST00000463779 287 ntBASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 AC011495.1-201ENST00000498085 584 ntBASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 AP001582.1-201ENST00000525856 295 ntBASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 REXO1L4P-201ENST00000605109 1937 ntBASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 AC007787.1-201ENST00000588095 1583 ntBASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD3Q7Z3D4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AL162726.2-201ENST00000438986 1017 ntBASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 KRT17P7-201ENST00000451704 1104 ntBASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AC005252.2-201ENST00000624630 1141 ntBASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD3Q7Z3D4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms