Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 MIR661-201ENST00000384842 89 ntBASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 MIR770-201ENST00000390219 98 ntBASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 AL662799.1-202ENST00000614205 422 ntBASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 AL161772.1-201ENST00000610494 4412 ntBASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 AGAP7P-201ENST00000582299 2062 ntBASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 AGAP14-201ENST00000624701 2060 ntBASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NHLRC1Q6VVB1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 GNAQP1-201ENST00000444815 1067 ntBASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 DOC2GP-202ENST00000514950 1163 ntBASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NHLRC1Q6VVB1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms