Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 AL390755.1-201ENST00000623716 2027 ntBASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 RN7SL399P-201ENST00000471648 279 ntBASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 TPRX2P-201ENST00000535362 881 ntBASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF549Q6P9A3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 LINC00552-201ENST00000625151 2579 ntBASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF549Q6P9A3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 AC007787.1-201ENST00000588095 1583 ntBASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 AC026410.3-201ENST00000514280 936 ntBASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 OR2I1P-209ENST00000641730 5365 ntBASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 AL157414.3-201ENST00000624276 1954 ntBASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF549Q6P9A3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms