Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 AC083964.2-201ENST00000623988 2396 ntBASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 AC026979.3-201ENST00000607315 403 ntBASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM53Q6P2H8 AP3S2-216ENST00000617003 1561 ntBASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 DNM1P41-201ENST00000623634 3350 ntBASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC089987.1-201ENST00000551654 2209 ntBASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC093520.2-201ENST00000561830 333 ntBASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 RARRES2P9-201ENST00000565168 469 ntBASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
TMEM53Q6P2H8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TMEM53Q6P2H8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms