Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AL162726.2-201ENST00000438986 1017 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AL359711.2-201ENST00000563105 872 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AC124283.3-201ENST00000570869 594 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 WFDC1-204ENST00000613603 549 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AC006058.4-201ENST00000624016 1670 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AC112693.3-201ENST00000624819 1983 ntBASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LDLRAP1Q5SW96 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC126365.1-201ENST00000578585 1514 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 RN7SL692P-201ENST00000464677 288 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC011495.1-201ENST00000498085 584 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC004066.1-201ENST00000502488 802 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 ENPP7P5-201ENST00000541031 1031 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 C18orf15-201ENST00000623680 2534 ntBASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.29■□□□□ 0.04
LDLRAP1Q5SW96 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 AL138799.1-201ENST00000448213 1675 ntBASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LDLRAP1Q5SW96 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms