Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 AL606495.2-201ENST00000605867 535 ntBASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 BTBD7P1-201ENST00000447253 1453 ntBASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 AC087386.2-201ENST00000623212 4637 ntBASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.52□□□□□ -0.25
CHRFAM7AQ494W8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 AC112492.5-201ENST00000421897 457 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 AC093004.1-201ENST00000508850 424 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 AC084346.2-201ENST00000607097 949 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 AC106881.1-201ENST00000605849 3329 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 CICP24-201ENST00000605464 2705 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 C18orf15-201ENST00000623680 2534 ntBASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRFAM7AQ494W8 LINC01101-201ENST00000622953 1884 ntBASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.5□□□□□ -0.25
CHRFAM7AQ494W8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms