Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 AC004466.1-201ENST00000599515 1080 ntBASIC19.82■□□□□ 0.76
CCDC27Q2M243 AC132938.4-201ENST00000623835 848 ntBASIC19.82■□□□□ 0.76
CCDC27Q2M243 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC27Q2M243 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC27Q2M243 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC27Q2M243 CICP24-201ENST00000605464 2705 ntBASIC19.81■□□□□ 0.76
CCDC27Q2M243 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC27Q2M243 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 AC018442.1-201ENST00000421439 2061 ntBASIC19.8■□□□□ 0.76
CCDC27Q2M243 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CICP23-201ENST00000605013 2741 ntBASIC19.8■□□□□ 0.76
CCDC27Q2M243 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 AL355864.2-201ENST00000447420 863 ntBASIC19.8■□□□□ 0.76
CCDC27Q2M243 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC27Q2M243 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC27Q2M243 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC27Q2M243 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms