Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 AC015656.1-201ENST00000624209 3578 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNB1P98172 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNB1P98172 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNB1P98172 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
EFNB1P98172 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 AC022447.6-201ENST00000515522 438 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.66□□□□□ -0.22
EFNB1P98172 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 AL512361.1-201ENST00000554200 418 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNB1P98172 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 AP001059.3-201ENST00000619053 235 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
EFNB1P98172 AC005252.3-201ENST00000623855 2258 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 AC063926.3-201ENST00000624734 5658 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
EFNB1P98172 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 AC089987.1-201ENST00000551654 2209 ntBASIC13.66□□□□□ -0.22
EFNB1P98172 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNB1P98172 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNB1P98172 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
EFNB1P98172 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
EFNB1P98172 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 MIR574-201ENST00000385209 96 ntBASIC13.65□□□□□ -0.22
EFNB1P98172 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 HLA-K-203ENST00000430151 1046 ntBASIC13.65□□□□□ -0.22
EFNB1P98172 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 AC004066.1-201ENST00000502488 802 ntBASIC13.65□□□□□ -0.22
EFNB1P98172 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.65□□□□□ -0.22
EFNB1P98172 AL512356.2-201ENST00000546955 174 ntBASIC13.65□□□□□ -0.22
EFNB1P98172 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.65□□□□□ -0.22
EFNB1P98172 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
EFNB1P98172 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
EFNB1P98172 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
EFNB1P98172 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
EFNB1P98172 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
EFNB1P98172 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
EFNB1P98172 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.65□□□□□ -0.22
EFNB1P98172 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNB1P98172 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
EFNB1P98172 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
EFNB1P98172 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNB1P98172 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms