Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTRA3P83110 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTRA3P83110 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.28■□□□□ 0.36
HTRA3P83110 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HTRA3P83110 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HTRA3P83110 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
HTRA3P83110 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HTRA3P83110 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HTRA3P83110 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
HTRA3P83110 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HTRA3P83110 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HTRA3P83110 SNORA57-201ENST00000383870 149 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.27■□□□□ 0.36
HTRA3P83110 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.27■□□□□ 0.36
HTRA3P83110 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 AC092896.1-201ENST00000465850 380 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 RPS18P9-201ENST00000482817 460 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 BCRP4-201ENST00000506079 804 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 AC113347.2-201ENST00000512350 279 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.27■□□□□ 0.36
HTRA3P83110 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 URB1-AS1-201ENST00000534991 831 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.27■□□□□ 0.36
HTRA3P83110 MIR4640-201ENST00000581824 90 ntBASIC17.27■□□□□ 0.36
HTRA3P83110 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTRA3P83110 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.27■□□□□ 0.36
HTRA3P83110 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.27■□□□□ 0.36
HTRA3P83110 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HTRA3P83110 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
HTRA3P83110 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTRA3P83110 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
HTRA3P83110 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTRA3P83110 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HTRA3P83110 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTRA3P83110 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.27■□□□□ 0.35
HTRA3P83110 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HTRA3P83110 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HTRA3P83110 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.26■□□□□ 0.35
HTRA3P83110 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HTRA3P83110 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
HTRA3P83110 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.26■□□□□ 0.35
HTRA3P83110 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.26■□□□□ 0.35
HTRA3P83110 AC104961.1-201ENST00000427605 771 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 HMGA1P2-201ENST00000430198 324 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 PEBP1P3-201ENST00000455475 548 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 AC078814.4-201ENST00000546650 327 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.26■□□□□ 0.35
HTRA3P83110 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 AC006986.1-201ENST00000612764 241 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 AC009145.4-201ENST00000625119 1294 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 AP000769.1-203ENST00000637245 208 ntBASIC17.26■□□□□ 0.35
HTRA3P83110 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
HTRA3P83110 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.26■□□□□ 0.35
HTRA3P83110 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTRA3P83110 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HTRA3P83110 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.25■□□□□ 0.35
HTRA3P83110 PGAM1P11-201ENST00000416729 680 ntBASIC17.25■□□□□ 0.35
HTRA3P83110 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HTRA3P83110 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.25■□□□□ 0.35
HTRA3P83110 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.25■□□□□ 0.35
HTRA3P83110 KNOP1P1-201ENST00000542108 989 ntBASIC17.25■□□□□ 0.35
HTRA3P83110 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.25■□□□□ 0.35
HTRA3P83110 AC091304.3-201ENST00000566500 716 ntBASIC17.25■□□□□ 0.35
HTRA3P83110 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.25■□□□□ 0.35
HTRA3P83110 AC020904.3-201ENST00000624199 442 ntBASIC17.25■□□□□ 0.35
HTRA3P83110 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.25■□□□□ 0.35
HTRA3P83110 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTRA3P83110 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.25■□□□□ 0.35
HTRA3P83110 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms