Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CX3CL1P78423 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CX3CL1P78423 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 AC232323.1-201ENST00000540724 2099 ntBASIC12.41□□□□□ -0.42
CX3CL1P78423 REXO1L5P-201ENST00000622260 2098 ntBASIC12.41□□□□□ -0.42
CX3CL1P78423 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.41□□□□□ -0.42
CX3CL1P78423 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.41□□□□□ -0.42
CX3CL1P78423 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.41□□□□□ -0.42
CX3CL1P78423 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.41□□□□□ -0.42
CX3CL1P78423 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
CX3CL1P78423 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 AC092337.1-201ENST00000568699 1129 ntBASIC12.41□□□□□ -0.42
CX3CL1P78423 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 AC004840.1-201ENST00000636359 365 ntBASIC12.41□□□□□ -0.42
CX3CL1P78423 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CX3CL1P78423 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CX3CL1P78423 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CX3CL1P78423 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CX3CL1P78423 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.4□□□□□ -0.42
CX3CL1P78423 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CX3CL1P78423 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.4□□□□□ -0.42
CX3CL1P78423 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.4□□□□□ -0.42
CX3CL1P78423 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 AL133267.1-201ENST00000398220 340 ntBASIC12.4□□□□□ -0.42
CX3CL1P78423 MRPS18AP1-201ENST00000414458 589 ntBASIC12.4□□□□□ -0.42
CX3CL1P78423 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.4□□□□□ -0.42
CX3CL1P78423 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.4□□□□□ -0.42
CX3CL1P78423 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.4□□□□□ -0.42
CX3CL1P78423 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 AC015910.1-201ENST00000579400 975 ntBASIC12.4□□□□□ -0.42
CX3CL1P78423 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms