Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
VSX2P58304 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VSX2P58304 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.69□□□□□ -0.06
VSX2P58304 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.69□□□□□ -0.06
VSX2P58304 AC068587.3-201ENST00000526613 355 ntBASIC14.69□□□□□ -0.06
VSX2P58304 SLC25A47P1-201ENST00000531577 414 ntBASIC14.69□□□□□ -0.06
VSX2P58304 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.69□□□□□ -0.06
VSX2P58304 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 MSTO2P-201ENST00000314835 1709 ntBASIC14.69□□□□□ -0.06
VSX2P58304 TMBIM7P-203ENST00000641617 1718 ntBASIC14.69□□□□□ -0.06
VSX2P58304 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.69□□□□□ -0.06
VSX2P58304 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
VSX2P58304 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VSX2P58304 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
VSX2P58304 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 BAATP1-201ENST00000412284 1225 ntBASIC14.68□□□□□ -0.06
VSX2P58304 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.68□□□□□ -0.06
VSX2P58304 USP32P1-208ENST00000506594 1164 ntBASIC14.68□□□□□ -0.06
VSX2P58304 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.68□□□□□ -0.06
VSX2P58304 KRT17P8-201ENST00000540749 863 ntBASIC14.68□□□□□ -0.06
VSX2P58304 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 BTNL10-201ENST00000595971 695 ntBASIC14.68□□□□□ -0.06
VSX2P58304 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 C18orf15-201ENST00000623680 2534 ntBASIC14.68□□□□□ -0.06
VSX2P58304 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VSX2P58304 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.68□□□□□ -0.06
VSX2P58304 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VSX2P58304 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VSX2P58304 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 AC134312.5-201ENST00000568031 1313 ntBASIC14.67□□□□□ -0.06
VSX2P58304 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms