Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN6P56747 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN6P56747 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN6P56747 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN6P56747 EEF1DP6-201ENST00000449232 372 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 RNMTL1P1-201ENST00000454103 560 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 AC022217.1-201ENST00000521069 738 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 AL645939.5-201ENST00000606834 243 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 AF254983.2-201ENST00000612331 135 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN6P56747 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 PCDHA1-201ENST00000378133 2726 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 TSPY26P-202ENST00000565928 3884 ntBASIC14.66□□□□□ -0.06
CLDN6P56747 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN6P56747 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN6P56747 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN6P56747 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN6P56747 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 AL139094.1-201ENST00000405549 1188 ntBASIC14.65□□□□□ -0.06
CLDN6P56747 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 RN7SL713P-201ENST00000582127 302 ntBASIC14.65□□□□□ -0.06
CLDN6P56747 AC004466.1-201ENST00000599515 1080 ntBASIC14.65□□□□□ -0.06
CLDN6P56747 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.65□□□□□ -0.06
CLDN6P56747 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN6P56747 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN6P56747 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN6P56747 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN6P56747 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CLDN6P56747 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLDN6P56747 AC011477.6-201ENST00000604980 1927 ntBASIC14.64□□□□□ -0.07
CLDN6P56747 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN6P56747 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
CLDN6P56747 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN6P56747 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN6P56747 AC068587.6-202ENST00000641839 5619 ntBASIC14.64□□□□□ -0.07
CLDN6P56747 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN6P56747 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN6P56747 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLDN6P56747 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN6P56747 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN6P56747 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN6P56747 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN6P56747 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms