Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BRPF1P55201 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRPF1P55201 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRPF1P55201 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRPF1P55201 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.45■□□□□ 0.7
BRPF1P55201 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRPF1P55201 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BRPF1P55201 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRPF1P55201 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BRPF1P55201 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.44■□□□□ 0.7
BRPF1P55201 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 FGD5P1-202ENST00000614866 2498 ntBASIC19.44■□□□□ 0.7
BRPF1P55201 AL137783.1-201ENST00000623494 1896 ntBASIC19.44■□□□□ 0.7
BRPF1P55201 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.44■□□□□ 0.7
BRPF1P55201 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 AC009486.1-201ENST00000569860 813 ntBASIC19.44■□□□□ 0.7
BRPF1P55201 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
BRPF1P55201 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.44■□□□□ 0.7
BRPF1P55201 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRPF1P55201 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BRPF1P55201 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BRPF1P55201 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.43■□□□□ 0.7
BRPF1P55201 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.43■□□□□ 0.7
BRPF1P55201 MIR5189-201ENST00000577370 114 ntBASIC19.43■□□□□ 0.7
BRPF1P55201 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BRPF1P55201 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BRPF1P55201 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.43■□□□□ 0.7
BRPF1P55201 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.43■□□□□ 0.7
BRPF1P55201 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
BRPF1P55201 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.43■□□□□ 0.7
BRPF1P55201 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRPF1P55201 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.42■□□□□ 0.7
BRPF1P55201 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BRPF1P55201 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BRPF1P55201 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.42■□□□□ 0.7
BRPF1P55201 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 ANKRD19P-201ENST00000338192 862 ntBASIC19.42■□□□□ 0.7
BRPF1P55201 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
BRPF1P55201 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
BRPF1P55201 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRPF1P55201 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms