Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 AC018695.7-201ENST00000624587 2492 ntBASIC16.81■□□□□ 0.28
LBX1P52954 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LBX1P52954 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LBX1P52954 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LBX1P52954 SNORA57-201ENST00000383870 149 ntBASIC16.81■□□□□ 0.28
LBX1P52954 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.81■□□□□ 0.28
LBX1P52954 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 PEBP1P3-201ENST00000455475 548 ntBASIC16.81■□□□□ 0.28
LBX1P52954 AP000920.1-201ENST00000531824 344 ntBASIC16.81■□□□□ 0.28
LBX1P52954 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LBX1P52954 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 AC023968.2-201ENST00000560593 1049 ntBASIC16.81■□□□□ 0.28
LBX1P52954 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 AL022334.2-201ENST00000610000 484 ntBASIC16.81■□□□□ 0.28
LBX1P52954 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LBX1P52954 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
LBX1P52954 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LBX1P52954 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LBX1P52954 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LBX1P52954 AC008536.3-201ENST00000623282 1599 ntBASIC16.81■□□□□ 0.28
LBX1P52954 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.8■□□□□ 0.28
LBX1P52954 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.8■□□□□ 0.28
LBX1P52954 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LBX1P52954 AL136172.1-201ENST00000598590 1394 ntBASIC16.8■□□□□ 0.28
LBX1P52954 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LBX1P52954 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.8■□□□□ 0.28
LBX1P52954 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.8■□□□□ 0.28
LBX1P52954 KRT18P36-201ENST00000411618 1276 ntBASIC16.8■□□□□ 0.28
LBX1P52954 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.8■□□□□ 0.28
LBX1P52954 AC073869.2-201ENST00000417338 1026 ntBASIC16.8■□□□□ 0.28
LBX1P52954 BX088651.3-201ENST00000418155 352 ntBASIC16.8■□□□□ 0.28
LBX1P52954 CDCA4P4-201ENST00000435216 680 ntBASIC16.8■□□□□ 0.28
LBX1P52954 AL356000.1-201ENST00000441073 1238 ntBASIC16.8■□□□□ 0.28
LBX1P52954 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.8■□□□□ 0.28
LBX1P52954 RPS18P9-201ENST00000482817 460 ntBASIC16.8■□□□□ 0.28
LBX1P52954 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.8■□□□□ 0.28
LBX1P52954 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.8■□□□□ 0.28
LBX1P52954 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC16.8■□□□□ 0.28
LBX1P52954 AC013553.1-201ENST00000560906 267 ntBASIC16.8■□□□□ 0.28
LBX1P52954 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.8■□□□□ 0.28
LBX1P52954 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.8■□□□□ 0.28
LBX1P52954 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.8■□□□□ 0.28
LBX1P52954 AC006449.5-201ENST00000610658 2098 ntBASIC16.8■□□□□ 0.28
LBX1P52954 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.8■□□□□ 0.28
LBX1P52954 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.8■□□□□ 0.28
LBX1P52954 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LBX1P52954 AC006372.4-201ENST00000624122 1543 ntBASIC16.8■□□□□ 0.28
LBX1P52954 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LBX1P52954 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.8■□□□□ 0.28
LBX1P52954 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.79■□□□□ 0.28
LBX1P52954 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 AC018638.5-201ENST00000450885 754 ntBASIC16.79■□□□□ 0.28
LBX1P52954 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 AC113347.2-201ENST00000512350 279 ntBASIC16.79■□□□□ 0.28
LBX1P52954 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.79■□□□□ 0.28
LBX1P52954 AC078814.4-201ENST00000546650 327 ntBASIC16.79■□□□□ 0.28
LBX1P52954 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.79■□□□□ 0.28
LBX1P52954 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.79■□□□□ 0.28
LBX1P52954 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms